Survival-associated eQTLs across different cancer types
We identified 22,212 eQTLs associated with patient overall survival across different cancer types at FDR < 0.05.
Cancer type
|
SNP ID
|
SNP position (hg19)
|
Alleles (A/a)
|
log-rank test p-value
|
Sample size
|
Median survival time AA
|
Median survival time Aa
|
Median survival time aa
|
|
---|---|---|---|---|---|---|---|---|---|
KIRP | rs72994399 | chr1:119909284 | A/G | 0 | 214 | 17.02 | 12.58 | 2.62 | KM Plot |
KIRP | rs73045341 | chr2:202016550 | G/T | 0.000625 | 213 | 14.03 | 19.33 | 10.83 | KM Plot |
KIRP | rs73049332 | chr1:178040331 | T/C | 2.63E-5 | 210 | 15.33 | 18 | 9.92 | KM Plot |
KIRP | rs73221103 | chr4:706740 | T/C | 0.000186 | 206 | 14.68 | 20.4 | 15.07 | KM Plot |
KIRP | rs73242322 | chr8:30035089 | T/C | 1.51E-6 | 208 | 14.8 | 17.52 | 0.2 | KM Plot |
KIRP | rs73283859 | chr16:90062520 | G/C | 1.46E-6 | 207 | 16.53 | 13.8 | 9.77 | KM Plot |
KIRP | rs73283869 | chr16:90067184 | G/A | 1.31E-6 | 207 | 16.93 | 13.8 | 9.77 | KM Plot |
KIRP | rs73285824 | chr10:63366163 | A/G | 0 | 213 | 18.25 | 9.62 | 1.17 | KM Plot |
KIRP | rs73285827 | chr10:63369432 | G/A | 0 | 210 | 18.03 | 8.07 | 1.17 | KM Plot |
KIRP | rs73301712 | chr14:59898245 | T/G | 0.000173 | 212 | 16.97 | 14.1 | 2.07 | KM Plot |
KIRP | rs73301725 | chr14:59902159 | T/C | 0.000173 | 211 | 16.93 | 14.48 | 2.93 | KM Plot |
KIRP | rs73301741 | chr14:59908444 | G/C | 0.000182 | 210 | 16.53 | 14.87 | 2.93 | KM Plot |
KIRP | rs73301746 | chr14:59908485 | C/T | 0.000182 | 210 | 16.53 | 14.87 | 2.93 | KM Plot |
KIRP | rs73325389 | chr17:46104645 | A/G | 2.63E-8 | 209 | 16.43 | 14.83 | 9 | KM Plot |
KIRP | rs7332564 | chr13:110655568 | T/G | 7.86E-10 | 210 | 16.43 | 16.03 | 8.47 | KM Plot |